.. _tutorials:

===========================
Tutorials
===========================

Tutorials give selected application examples to get familiar with typical use cases.

Tutorials are provided as Jupyter notebooks.


.. toctree::
   :maxdepth: 1
   :caption: Tutorials about fluopy
   :name: toc_tutorials_data

   General introduction <./notebooks/01_Introduction.ipynb>
   Three state simulation <./notebooks/02_Three_state_simulation.ipynb>
   Cy5 simulation <./notebooks/03_Cy5_simulation.ipynb>
   dSTORM simulation <./notebooks/04_dSTORM_simulation.ipynb>
   FRET pair simluation <./notebooks/05_FRET_pair_simulation.ipynb>
   Cy5 homoFRET simulation <./notebooks/06_Cy5_homoFRET_simulation.ipynb>
   Two-fluorophore dSTORM simulation <./notebooks/07_Two_fluorophore_dSTORM_simulation.ipynb>

   Extending fluopy data <./notebooks/Tutorial_extending_fluopy.ipynb>
   Fluopy IO <./notebooks/Tutorial_fluopy_io.ipynb>
   Distributed simulation <./notebooks/Tutorial_distributed_simulation.ipynb>


.. toctree::
   :maxdepth: 1
   :caption: More
   :name: notebook_execution_table

   Notebook execution table <notebook_execution_table>