fluopy.fluo_data¶

Photophysical constants for specific fluorophores.

This module provides a dataclass container to hold photophysical constants.

Attributes¶

`cy5_dna`
`atto643`

Classes¶

FluorophoreData

Container for all constant photophysical attributes of a fluorophore.

Module Contents¶

class fluopy.fluo_data.FluorophoreData[source]¶

Container for all constant photophysical attributes of a fluorophore. The naming of constants is closely related to TransitionType.

data_files: str | pathlib.Path | None = None¶

QUANTUM_YIELD: float = 0¶

FLUORESCENCE_LIFETIME: float = 0¶

S1_QUENCH_RATE: float = 0¶

ISC_ST_RATE: float = 0¶

ISC_TS_RATE: float = 0¶

RISC_RATE: float = 0¶

STA_EFFICIENCY: float = 0¶

PHOTOBLEACH_T1_RATE: float = 0¶

PHOTOBLEACH_T2_RATE: float = 0¶

DSTORM_PET_T_RATE_MOL: float = 0¶

DSTORM_PET_S_RATE_MOL: float = 0¶

DSTORM_PET_SUCCESS_RATE: float = 0¶

DSTORM_TH_EL_RATE_1: float = 0¶

DSTORM_TH_EL_RATE_2: float = 0¶

DSTORM_P_EL_CROSS_SECTION: float = 0¶

RAD_ESCAPE_EFFICIENCY: float = 0¶

RAD_RELAX_RATE: float = 0¶

OFRET_EFFICIENCY: float = 0¶

ISO_RATE: float = 0¶

BISO_CROSS_SECTION: float = 0¶

BISO_THERMAL_RATE: float = 0¶

BISO_EFFICIENCY: float = 0¶

H2O_ATTACK_S: float = 0¶

H2O_ATTACK_T: float = 0¶

BACK_REACTION: float = 0¶

fluopy.fluo_data.cy5_dna¶

fluopy.fluo_data.atto643¶